Apendice A: Lecturas Recomendadas

LIBROS:

• Computer-aided molecular design: theory and Applications. J-P. Doucet. Academic Press Harcourt brace & Company, Publishers.
• Introduction to Protein Structure. C. Branden and J. Tooze. Garland, New York (1991).
• Protein architecture: a practical approach. A.M. Lesk. IRL press, Oxford (1991).
• Protein Structure Prediction: A practical Approach. Edited by Michael J.E. Sternberg. Oxford University Press.
• The Protein Folding Problem and Tertiary Structure Prediction. Edited by Kenneth M Merz, Jr and Scott M. Le Grand. Bikhäuser Verlag.
• Strucure in Protein Chemistry.J. Kyte. Garlan Publishing, Inc. (1995)

ARTICULOS DE REVISTAS

• A novel super-secondary structure of proteins and the relation between the structure and amino acid sequence. A.V. Efimov. FEBS Lett. 166, 33-38 (1984).
• A time-efficient, linear-space local similarity algorithm. X. Huang, M. Miller. Adv. Appl. Math. 12:337-357 (1991).
• Assessment of protein models with three-dimensional profiles. R. Lüthy, J.U. Bowie, D. Eisenberg. Nature 356:83-85 (1992).
• Basic local alignment search tool. S.F. Altschul, W. Gish, W. Miller, E.W. Myers, D.J. Lipman. J. Mol. Biol. 215:403-410 (1990).
• B-hairpin families in globular proteins. B.L. Sibanda and J.M. Thornton. Nature 316, 170-174 (1985).
• Calculation of Conformational Ensembles from Potentials of Mean Force: an approach to the knowledge based prediction of local structures in globular proteins. Sippl, J.M. J. Mol. Biol. 213,859-883 (1990).
• CHARMM: A program for macromolecular energy, minimization and dynamics calculation. B.R. Brooks, R.E. Bruccoleri, B.D. Olafson, D.J. States, S. Swaminathan, M. Karplus J. Comp. Chem. 4:187-217 (1983).
• Comparison of super-secondary structures in proteins. S.T. Rao and M.G. Rossman. J. Mol. Biol. 76 241-256 (1973).
• Comparison of the structures of cro and lambda repressor proteins in bacteriophage lambda. D.H. Ohlendorf, W.F. Anderson, M. Lewis, C.O. Pabo and B.W. Matthews. J. Mol. Biol. 169 757-769 (1983).
• Conformation of b-hairpins in protein structures. B.L. Sibanda, T.L. Blundell and J.M. Thornton. J.Mol. Biol. 206, 759-777 (1989).
• Improved tools for biological sequence comparison. W.R. Pearson, D.J. Lipman. Proc. Natl. Acad. Sci. U.S.A. 85:2444-2448 (1988).
• Knowledge-based model building of proteins: Concepts and examples. J. Bajorath, R. Stenkamp, A. Aruffo Prot. Sci. 2:1798-1810 (1993).
• Principles that determine the structure of proteins. C. Chothia. Ann. Rev. Biochem. 53 537-572 (1984).
• ProMod and Swiss-Model: Internet-based tools for automated comparative protein modelling. M.C. Peitsch. Biochem Soc Trans 24:274-279 (1996).
• Protein modelling by E-Mail. M.C. Peitsch Bio/Technology (Nature) 13:658-660 (1995).
• Recognition of errors in three-dimensional structres of proteins. M.J. Sippl Proteins Struct. Funct. Genet. 17:355-362 (1993).
• Structure and evolution of calcium modulated proteins. R.H. Kretsinger. CRC Crit. Rev. Biochem. 8, 119-174 (1980).
• Structure of a-a-hairpins with short connections. A.V. Efimov. Protein Engin.4, 245-250 (1991).
• Structure of b-b-hairpins and b-b-corners. A.V. Efimov. FEBS Lett., 284, 288-292 (1991).
• Structure of proteins: Packing of a helices and b sheets. C. Chothia, M. Levitt and D. Richardson. Proc. Natl. Acad. Sci. USA 74 4130-4134 (1977).
• SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modelling. Guex, N. and Peitsch, M. C. Electrophoresis 18:2714-2723. (1997)
• The anatomy and taxonomy of protein structure J.S. Richardson. Adv. Prot. Chem. 34 167-339 (1981).
• The relation between the divergence of sequence and structure in proteins. C. Chothia, A.M. Lesk. EMBO J. 5:823-826 (1986).